Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939983.1_cds_XP_016484360.1_75390
CDS Infomation

[gene=LOC107804925] [db_xref=GeneID:107804925] [protein=phosphoinositide phospholipase C 4-like] [protein_id=XP_016484360.1] [location=complement(join(32108..32401,32625..32711,32785..32937,34025..34142,34247..34458,34793..35047,35130..35265,36960..37156,38992..39306))] [gbkey=CDS]
Sequence

ATGGGGAGTTATAGAGTATGTGTGTGTTTTACAAGAAAATTCAGAGTAACAGAAGCAGAG
CCACCATCAGATGTAAAAGAAGCATTCAAGAAATATGCTGAAAATGGGAACCAAATGAAT
TCAGAACAGTTACTGAAATTCTTGATTGAAGTACAAGGAGAGACCCTTTTGACTGTTGGT
GATGCTGATGCCATTGTTCGTCAGATCCTTCAGAAAAGACACCCCATTACTAAGTTAACT
CGTCAAACTCTTGCTCTTGAAGATTTTCATCATTTCCTCTTCAGTACTGACCTTAATCCA
CCAATTAATTATAAGGTTCACCATGATATGAATGCTCCACTCTCCCATTATTTTATATTC
ACGGGGCATAATTCTTACTTGACTGGGAATCAGCTGACGAGTGATTGCAGTGATGTCCCA
ATTATAAAGGCGCTGAAAAAAGGTGTAAGAGTGATAGAGCTTGATATATGGCCAAATTCT
GACAAGGATGACATACACGTACTTCACGGAAGGACAGTGACAACCCCTGTGGAATTAATA
AGATGTCTCAAGTCAATAAAAGAACATGCATTTGTGGCTTCTCCTTATCCTCTTGTAATT
ACACTGGAAGATCACCTAACGCCTGATCTTCAGGCTAAAGTGGCTCAGATGCTCACTGAA
ACATTTGGAGAAATGCTCTTTGTTCCTGAATCAGATTCTCTAAAGGAATGCCCTACACCA
GAAGAACTAAAGCATCGTATAATTATTTCAACCAAACCTCCTAAAGAGTACCTTGAGGCC
AGCGCCAGTACTACTGCTAGTAAAGAGAGACGAAATAGCTCCCAGAGATCAAATTGTTCC
GAGGATGATGTATGGGGCACTGAACCTTCAAGCTTGACAGCCGATCAAGAAGAAAATGAA
AAGAGTGACAGTGATAATTTTGAAGATGAAGATGACTCCAATCACAGACCACAGTTAGCA
TCTGCTTATAAACGCCTGATCGCCATCCACGCCGGGAAGCCTAAAGGTGGATTAAAGGAG
GCACTGAAAGTCGATCCTGATAAAGTAAGACGACTAAGTTTAAGTGAACAGGCTCTCGAA
AAGGCTGCCGAATCTCATGGAACGGAAATTGTGAGGTTCACGCAAAGAAACATTTTAAGG
GTGTACCCTAAAGGTACTAGGTTTAACTCCTCCAACTACAAGCCACTAATCGGTTGGATG
CATGGAGCTCAGATGGTTGCATTTAATATGCAGGGATACGGTAGAGCACTATGGTTGATG
CATGGGATGTTCAGGTCAAATGGAGGCTGTGGTTATGTTAAGAAGCCTGATTTCTTGCTA
AATGTTGGTCCTAATAATGAAGTTTTTGATCCTAAGGCAAAGTTGCCAGTTAAGATAACC
TTAAAGGTGAAAGTATATATGGGAGATGGATGGCATTTAGATTTCAAGCAAACACACTTT
GACTTGTATTCGCCTCCGGACTTCTACACAAGGGTTGGGATAGCCGGAGTGCCTGCTGAT
GAGATAATGAAGAAAACAAAAACTAAAGAGGATAAATGGACGCCAGTTTGGGATGAAGAA
TTTACCTTCCCACTAACTGTGCCCGAATTAGCTTTGCTGCGAATTGAAGCACACGAGTAT
GACATGTCAGAAAAGGATGATTTTGCAGGCCAAACATGTATACCTATTTCAGAGTTGAAA
CCTGGGATTCATGCAGTTCCTCTTTGTGACCGAAAAGGTGAGAAATTTAGTTCCGCGAGG
CTACTCATGCGCTTTGAGTTCGTATAA

Peptide Sequence

PEP ID

XP_016484360.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tabacum]
Sequence

MGSYRVCVCFTRKFRVTEAEPPSDVKEAFKKYAENGNQMNSEQLLKFLIEVQGETLLTVG
DADAIVRQILQKRHPITKLTRQTLALEDFHHFLFSTDLNPPINYKVHHDMNAPLSHYFIF
TGHNSYLTGNQLTSDCSDVPIIKALKKGVRVIELDIWPNSDKDDIHVLHGRTVTTPVELI
RCLKSIKEHAFVASPYPLVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKECPTP
EELKHRIIISTKPPKEYLEASASTTASKERRNSSQRSNCSEDDVWGTEPSSLTADQEENE
KSDSDNFEDEDDSNHRPQLASAYKRLIAIHAGKPKGGLKEALKVDPDKVRRLSLSEQALE
KAAESHGTEIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAFNMQGYGRALWLM
HGMFRSNGGCGYVKKPDFLLNVGPNNEVFDPKAKLPVKITLKVKVYMGDGWHLDFKQTHF
DLYSPPDFYTRVGIAGVPADEIMKKTKTKEDKWTPVWDEEFTFPLTVPELALLRIEAHEY
DMSEKDDFAGQTCIPISELKPGIHAVPLCDRKGEKFSSARLLMRFEFV

Transcript Sequence

Gene sequence data has not been registered.